MLOC_37763 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.614.995915.862134.84523
LEAShoots from the seedlings (10 cm shoot stage)1.8701627.5283.104718.57758
INF1Young developing inflorescences (5mm)3.223268.06286.600544.66906
INF2Developing inflorescences (1-1.5 cm)12.2649.602829.979310.8892
ROORoots from the seedlings (10 cm shoot stage)1.661984.978414.424214.8776
NODDeveloping tillers at six leaf stage, 3rd internode1.177172.879211.458057.89007
CAR5Developing grain, bracts removed (5 DPA)18.518517.532518.359316.1996
CAR15Developing grain, bracts removed (15 DPA)7.948594.890739.476115.309



CDS Structure of MLOC_37763






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37763.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251855.1NoneNoneNoneNone
MLOC_37763.1CUST_2410_PI427708080AvailableAvailablecontig_2549060 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g62900.1 +2 0.0 1221 646/722 (89%) 13101.m06749 protein amino acid kinase, putative, expressed
TAIR PP10 AT2G39800.4 +2 0.0 965 510/716 (71%) | Symbols: P5CS1 | delta1-pyrroline-5-carboxylate synthase 1 | chr2:16598516-16602939 REVERSE LENGTH=717