MLOC_37761 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains43.139735.204737.12343.2761
LEAShoots from the seedlings (10 cm shoot stage)32.737420.44828.388126.2139
INF1Young developing inflorescences (5mm)70.337778.047686.72874.8185
INF2Developing inflorescences (1-1.5 cm)113.147107.092102.306135.257
ROORoots from the seedlings (10 cm shoot stage)37.091339.384434.848157.9021
NODDeveloping tillers at six leaf stage, 3rd internode25.253838.654652.9304150.162
CAR5Developing grain, bracts removed (5 DPA)38.138839.320840.487545.5527
CAR15Developing grain, bracts removed (15 DPA)24.327720.942928.536663.0296



CDS Structure of MLOC_37761






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37761.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369402NoneNoneNoneNone
MLOC_37761.1CUST_2409_PI427708080AvailableAvailablecontig_2549053 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g34640.1 +2 6e-125 366 223/258 (86%) 13105.m03605 protein PHD finger protein, putative, expressed
TAIR PP10 AT5G26210.1 +2 2e-94 287 174/258 (67%) | Symbols: AL4 | alfin-like 4 | chr5:9158566-9160221 REVERSE LENGTH=255