MLOC_37740 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains605.688470.854531.583533.017
LEAShoots from the seedlings (10 cm shoot stage)216.02666.155979.2402109.11
INF1Young developing inflorescences (5mm)142.685128.896141.364120.815
INF2Developing inflorescences (1-1.5 cm)100.084136.272146.073145.844
ROORoots from the seedlings (10 cm shoot stage)280.869281.014234.875341.843
NODDeveloping tillers at six leaf stage, 3rd internode268.114236.66330.1069700.95
CAR5Developing grain, bracts removed (5 DPA)653.393662.317673.694676.905
CAR15Developing grain, bracts removed (15 DPA)8.041984.0346311.726617.6303



CDS Structure of MLOC_37740






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37740.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248165.1NoneNoneNoneNone
MLOC_37740.3CUST_2406_PI427708080AvailableAvailablecontig_2548992 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g49600.1 +3 0.0 825 379/441 (86%) 13103.m05379 protein Os3bglu7 - beta-glucosidase, exo-beta-glucanse, expressed
TAIR PP10 AT3G18080.1 +3 0.0 603 287/445 (64%) | Symbols: BGLU44 | B-S glucosidase 44 | chr3:6191586-6194124 FORWARD LENGTH=512