- Predicted Gene MLOC_37686
MLOC_37686 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_37686_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_37686_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.19662 | 4.02995 | 3.76011 | 3.383 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.41735 | 6.04578 | 5.84238 | 5.81201 |
INF1 | Young developing inflorescences (5mm) | 51.1707 | 52.8942 | 56.1724 | 42.621 |
INF2 | Developing inflorescences (1-1.5 cm) | 46.5459 | 42.3445 | 39.256 | 44.8198 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.54883 | 7.62596 | 6.94944 | 8.38283 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.530553 | 0.716792 | 1.0307 | 2.52152 |
CAR5 | Developing grain, bracts removed (5 DPA) | 17.8544 | 15.6441 | 14.2829 | 14.5652 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.75562 | 3.54765 | 2.63176 | 7.45449 |
CDS Structure of MLOC_37686
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_37686.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g40830.3 |
+3 |
0.0 |
1024 |
570/1011 (56%) |
13108.m04373 protein pumilio domain-containing protein PPD1, putative, expressed |
TAIR PP10 |
AT3G20250.1 |
+3 |
1e-150 |
483 |
284/637 (45%) |
| Symbols: APUM5, PUM5 | pumilio 5 | chr3:7059098-7062660 REVERSE LENGTH=961 |