MLOC_37671 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains239.278218.589226.135244.722
LEAShoots from the seedlings (10 cm shoot stage)80.8832120.872155.62113.329
INF1Young developing inflorescences (5mm)29.906237.588447.087734.6826
INF2Developing inflorescences (1-1.5 cm)51.114438.064854.882653.7324
ROORoots from the seedlings (10 cm shoot stage)169.232178.248167.332230.469
NODDeveloping tillers at six leaf stage, 3rd internode196.583230.656250.763881.688
CAR5Developing grain, bracts removed (5 DPA)154.796155.401157.007162.488
CAR15Developing grain, bracts removed (15 DPA)93.907591.748488.7293224.626



CDS Structure of MLOC_37671






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37671.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356359NoneNoneNoneNone
MLOC_37671.2CUST_2394_PI427708080AvailableAvailablecontig_2548850 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g57260.1 +1 0.0 699 400/447 (89%) 13102.m06589 protein 3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed
TAIR PP10 AT2G33150.1 +1 0.0 634 355/461 (77%) | Symbols: PKT3, PED1, KAT2 | peroxisomal 3-ketoacyl-CoA thiolase 3 | chr2:14047814-14050983 REVERSE LENGTH=462