MLOC_37666 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.568272.33342.138072.54641
LEAShoots from the seedlings (10 cm shoot stage)3.180413.950874.664283.39216
INF1Young developing inflorescences (5mm)0.9421820.9895961.037150.926003
INF2Developing inflorescences (1-1.5 cm)0.8376470.8693760.7920841.023
ROORoots from the seedlings (10 cm shoot stage)7.86448.463675.6912610.1278
NODDeveloping tillers at six leaf stage, 3rd internode2.012392.206773.897527.78193
CAR5Developing grain, bracts removed (5 DPA)0.7072231.016580.9862621.01135
CAR15Developing grain, bracts removed (15 DPA)0.121590.1216960.1760830.369039



CDS Structure of MLOC_37666






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37666.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369505NoneNoneNoneNone
MLOC_37666.2CUST_2393_PI427708080AvailableAvailablecontig_2548840 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g53990.1 +3 1e-71 243 155/213 (73%) 13104.m05576 protein ethylene-responsive protein related, putative, expressed
TAIR PP10 AT1G61660.3 +3 6e-42 157 84/134 (63%) basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:22754366-22756171 REVERSE LENGTH=390