MLOC_37645 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains45.792530.357539.765137.4756
LEAShoots from the seedlings (10 cm shoot stage)63.3336100.783132.0881.9249
INF1Young developing inflorescences (5mm)20.915922.320622.143118.4331
INF2Developing inflorescences (1-1.5 cm)25.490427.035223.734327.3993
ROORoots from the seedlings (10 cm shoot stage)46.24133.764128.89242.0558
NODDeveloping tillers at six leaf stage, 3rd internode60.91589.6535100.838264.434
CAR5Developing grain, bracts removed (5 DPA)70.50170.880874.044567.219
CAR15Developing grain, bracts removed (15 DPA)139.354143.627123.139313.793



CDS Structure of MLOC_37645






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37645.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367946NoneNoneNoneNone
MLOC_37645.1CUST_2392_PI427708080AvailableAvailablecontig_2548781 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g68860.1 -3 0.0 701 325/380 (86%) 13101.m07506 protein zinc finger C-x8-C-x5-C-x3-H type family protein, expressed
TAIR PP10 AT3G02830.1 -3 1e-151 443 218/369 (59%) | Symbols: ZFN1 | zinc finger protein 1 | chr3:614075-615916 FORWARD LENGTH=397