MLOC_37614 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1705860.9670050.7203970.741926
LEAShoots from the seedlings (10 cm shoot stage)0.4204640.388810.2645610.307612
INF1Young developing inflorescences (5mm)0.1313020.04859820.1594070.115931
INF2Developing inflorescences (1-1.5 cm)0.2085240.1574270.2066690.224916
ROORoots from the seedlings (10 cm shoot stage)0.4368240.3065030.7568480.448485
NODDeveloping tillers at six leaf stage, 3rd internode0.1120030.1081040.2407030.438556
CAR5Developing grain, bracts removed (5 DPA)0.4582610.9022170.6612040.758349
CAR15Developing grain, bracts removed (15 DPA)0.170280.1436420.06108590.372935



CDS Structure of MLOC_37614






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37614.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37614.2CUST_5258_PI427708083AvailableAvailablecontig_2548722 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g40330.1 -2 8e-44 160 72/86 (84%) 13106.m04191 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT3G11440.1 -2 8e-36 136 62/85 (73%) | Symbols: ATMYB65, MYB65 | myb domain protein 65 | chr3:3603056-3604929 FORWARD LENGTH=553