MLOC_37606 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.450112.653793.111522.90108
LEAShoots from the seedlings (10 cm shoot stage)6.118526.663376.467165.65888
INF1Young developing inflorescences (5mm)3.530173.996694.212343.61703
INF2Developing inflorescences (1-1.5 cm)5.592075.173585.416296.28249
ROORoots from the seedlings (10 cm shoot stage)6.474586.056866.166847.54644
NODDeveloping tillers at six leaf stage, 3rd internode4.929064.779558.1373815.7733
CAR5Developing grain, bracts removed (5 DPA)3.065453.747574.37843.95241
CAR15Developing grain, bracts removed (15 DPA)1.038950.9325611.152332.62249



CDS Structure of MLOC_37606






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37606.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363662NoneNoneNoneNone
MLOC_37606.2CUST_2389_PI427708080AvailableAvailablecontig_2548700 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g32200.1 -3 5e-46 163 104/183 (57%) 13102.m03480 protein thioesterase family protein, putative, expressed
TAIR PP10 AT2G29590.1 -3 3e-28 112 61/123 (50%) Thioesterase superfamily protein | chr2:12654602-12655432 REVERSE LENGTH=158