MLOC_37586 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.1939414.401411.89328.72419
LEAShoots from the seedlings (10 cm shoot stage)18.24616.740612.400512.2579
INF1Young developing inflorescences (5mm)32.952428.761322.570920.6676
INF2Developing inflorescences (1-1.5 cm)27.406621.22619.730922.078
ROORoots from the seedlings (10 cm shoot stage)4.1405111.88878.6357710.5843
NODDeveloping tillers at six leaf stage, 3rd internode3.314913.790925.5108712.141
CAR5Developing grain, bracts removed (5 DPA)14.717411.982314.364711.1243
CAR15Developing grain, bracts removed (15 DPA)22.369220.079417.615139.2322



CDS Structure of MLOC_37586






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37586.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37586.1CUST_11532_PI427708080AvailableAvailablecontig_2548680 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g58910.2 +1 0.0 2128 1138/1653 (69%) 13103.m06469 protein expressed protein
TAIR PP10 AT4G13750.1 +1 0.0 1492 923/2215 (42%) | Symbols: NOV | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein | chr4:7975191-7987558 FORWARD LENGTH=2729