MLOC_37570 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.07783580.13537500.145133
LEAShoots from the seedlings (10 cm shoot stage)000.1226150.0949162
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)000.06364350.0507604
ROORoots from the seedlings (10 cm shoot stage)00.081479700.333314
NODDeveloping tillers at six leaf stage, 3rd internode00.01202870.01713220.0603995
CAR5Developing grain, bracts removed (5 DPA)00.1267250.06357140.103146
CAR15Developing grain, bracts removed (15 DPA)25.547623.399916.387957.3983



CDS Structure of MLOC_37570






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37570.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375605NoneNoneNoneNone
MLOC_37570.1CUST_2387_PI427708080AvailableAvailablecontig_2548649 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g39610.2 -1 2e-33 120 50/61 (82%) 13110.m03633 protein expressed protein
TAIR PP10 AT2G23240.1 -1 5e-18 78 32/53 (60%) Plant EC metallothionein-like protein, family 15 | chr2:9895995-9896325 REVERSE LENGTH=85