MLOC_37545 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.196498.895136.89228.59799
LEAShoots from the seedlings (10 cm shoot stage)8.989075.299944.591556.14949
INF1Young developing inflorescences (5mm)53.134352.451557.893148.2008
INF2Developing inflorescences (1-1.5 cm)59.713460.433457.83769.5239
ROORoots from the seedlings (10 cm shoot stage)2.004185.127593.928896.8088
NODDeveloping tillers at six leaf stage, 3rd internode0.3364810.7594313.210374.45251
CAR5Developing grain, bracts removed (5 DPA)10.9611.390512.455512.2417
CAR15Developing grain, bracts removed (15 DPA)8.101936.53276.4049717.155



CDS Structure of MLOC_37545






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37545.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37545.1CUST_11525_PI427708080AvailableAvailablecontig_2548602 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g31856.1 -2 0.0 1323 724/1007 (72%) 13110.m02784 protein midasin-related, putative, expressed
TAIR PP10 AT1G67120.1 -2 3e-166 550 380/1007 (38%) ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding | chr1:25069727-25095526 REVERSE LENGTH=5393