- Predicted Gene MLOC_37523
MLOC_37523 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 9.3877 | 25.6248 | 21.6979 | 21.8578 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 28.3653 | 21.1639 | 18.8398 | 21.1858 |
| INF1 | Young developing inflorescences (5mm) | 53.9889 | 54.4953 | 50.3499 | 46.235 |
| INF2 | Developing inflorescences (1-1.5 cm) | 85.3645 | 77.3204 | 66.5221 | 87.278 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 10.9881 | 22.1408 | 15.6165 | 27.1541 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 11.5239 | 19.0547 | 17.7097 | 69.5111 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 37.5973 | 31.4141 | 37.3723 | 35.4439 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 20.8224 | 20.2781 | 20.5853 | 47.1237 |
CDS Structure of MLOC_37523
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_37523.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g02290.1 |
+3 |
0.0 |
2617 |
1570/1943 (81%) |
13102.m00163 protein SNF2 family N-terminal domain containing protein, expressed |
| TAIR PP10 |
AT2G46020.2 |
+3 |
0.0 |
1812 |
1083/1887 (57%) |
| Symbols: CHR2, ATBRM, BRM, CHA2 | transcription regulatory protein SNF2, putative | chr2:18923304-18931769 FORWARD LENGTH=2193 |