- Predicted Gene MLOC_37477
MLOC_37477 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.82376 | 4.61632 | 4.52545 | 4.63571 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 13.6543 | 18.0294 | 12.7852 | 14.2389 |
| INF1 | Young developing inflorescences (5mm) | 3.92932 | 3.59371 | 5.18592 | 3.77102 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.42415 | 5.03313 | 5.81642 | 6.83191 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.42956 | 5.76518 | 4.30932 | 7.67116 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.18396 | 6.57584 | 6.49484 | 25.2534 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.48354 | 8.29868 | 6.37298 | 7.52805 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.87676 | 4.45528 | 4.33175 | 11.7692 |
CDS Structure of MLOC_37477
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_37477.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g38870.1 |
+2 |
1e-46 |
156 |
94/113 (83%) |
13111.m03823 protein helix-loop-helix DNA-binding domain containing protein, expressed |
| TAIR PP10 |
AT3G47640.3 |
+2 |
1e-20 |
86 |
42/81 (52%) |
| Symbols: PYE | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:17568035-17569101 FORWARD LENGTH=240 |