MLOC_37458 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)11.923737.877178.921431.096
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)000.07088830.0396754
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.06413090.17532200.116402
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_37458






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37458.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357279NoneNoneNoneNone
MLOC_37458.1CUST_2380_PI427708080AvailableAvailablecontig_2548451 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g14324.1 +2 4e-78 243 118/197 (60%) 13106.m01580 protein caleosin related protein, putative, expressed
TAIR PP10 AT1G70670.1 +2 1e-44 154 87/176 (49%) Caleosin-related family protein | chr1:26644830-26645970 FORWARD LENGTH=195