MLOC_37457 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains102.146126.12124.907120.994
LEAShoots from the seedlings (10 cm shoot stage)124.846112.978127.201106.934
INF1Young developing inflorescences (5mm)84.594587.249293.356773.0385
INF2Developing inflorescences (1-1.5 cm)91.0536106.074102.004105.212
ROORoots from the seedlings (10 cm shoot stage)141.575148.513123.659178.72
NODDeveloping tillers at six leaf stage, 3rd internode126.309148.421200.728523.55
CAR5Developing grain, bracts removed (5 DPA)114.825110.16111.828104.204
CAR15Developing grain, bracts removed (15 DPA)32.611232.353330.205169.9983



CDS Structure of MLOC_37457






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37457.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368167NoneNoneNoneNone
MLOC_37457.3CUST_2379_PI427708080AvailableAvailablecontig_2548448 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g55960.1 +1 0.0 1085 566/630 (90%) 13104.m05813 protein NADPH reductase, putative, expressed
TAIR PP10 AT4G30210.2 +1 0.0 865 466/633 (74%) | Symbols: ATR2, AR2 | P450 reductase 2 | chr4:14796900-14800578 FORWARD LENGTH=711