MLOC_37440 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains74.169339.448461.543342.6084
LEAShoots from the seedlings (10 cm shoot stage)112.329158.783185.08698.8561
INF1Young developing inflorescences (5mm)0.610669000.597632
INF2Developing inflorescences (1-1.5 cm)0.2158230.13370300.201492
ROORoots from the seedlings (10 cm shoot stage)943.49295.07333.165381.789
NODDeveloping tillers at six leaf stage, 3rd internode6.32938.3795415.995524.6021
CAR5Developing grain, bracts removed (5 DPA)0.09504970.5096951.21460.383685
CAR15Developing grain, bracts removed (15 DPA)0.3804430.4888160.2752460.722656



CDS Structure of MLOC_37440






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37440.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37440.1CUST_12228_PI427708083AvailableAvailablecontig_2548403 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g44060.1 +1 3e-44 155 75/84 (89%) 13104.m04385 protein aquaporin protein, putative, expressed
TAIR PP10 AT2G16850.1 +1 2e-42 150 69/77 (90%) | Symbols: PIP3B, PIP2;8 | plasma membrane intrinsic protein 2;8 | chr2:7301647-7303180 FORWARD LENGTH=278