MLOC_37434 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.074947.582658.189696.34568
LEAShoots from the seedlings (10 cm shoot stage)6.037356.589226.022914.96167
INF1Young developing inflorescences (5mm)6.30966.215085.540934.59433
INF2Developing inflorescences (1-1.5 cm)6.265895.736195.066465.65595
ROORoots from the seedlings (10 cm shoot stage)6.508436.080388.587287.25159
NODDeveloping tillers at six leaf stage, 3rd internode7.416385.129765.3515416.1284
CAR5Developing grain, bracts removed (5 DPA)4.967164.697015.033934.1831
CAR15Developing grain, bracts removed (15 DPA)2.08451.434981.868073.69604



CDS Structure of MLOC_37434






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37434.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37434.2CUST_12227_PI427708083AvailableAvailablecontig_2548395 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g28440.1 +1 6e-87 285 133/152 (88%) 13107.m02847 protein SNARE associated Golgi protein, putative, expressed
TAIR PP10 AT4G22850.2 +1 6e-55 194 85/150 (57%) SNARE associated Golgi protein family | chr4:11994194-11996048 FORWARD LENGTH=277