MLOC_37430 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.007218.19646.007156.39509
LEAShoots from the seedlings (10 cm shoot stage)8.672256.022910.22075.89585
INF1Young developing inflorescences (5mm)8.481368.974839.738265.5871
INF2Developing inflorescences (1-1.5 cm)6.646477.326496.097635.86473
ROORoots from the seedlings (10 cm shoot stage)3.144915.40763.28854.52045
NODDeveloping tillers at six leaf stage, 3rd internode10.277411.323113.825232.7409
CAR5Developing grain, bracts removed (5 DPA)6.766868.084468.015875.56953
CAR15Developing grain, bracts removed (15 DPA)1.741030.956892.40412.74575



CDS Structure of MLOC_37430






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37430.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37430.3NoneAvailableAvailablecontig_2548383 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g28420.1 +3 1e-19 90 54/60 (90%) 13103.m12825 protein 3-oxoacyl-synthase, putative, expressed
TAIR PP10 AT1G74960.3 +3 1e-13 71 44/60 (73%) | Symbols: FAB1 | fatty acid biosynthesis 1 | chr1:28152564-28155948 REVERSE LENGTH=541