MLOC_37426 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains121.7479.994581.628769.4176
LEAShoots from the seedlings (10 cm shoot stage)46.492431.292452.91728.869
INF1Young developing inflorescences (5mm)153.901140.179145.32490.3373
INF2Developing inflorescences (1-1.5 cm)85.945883.2106125.03975.9436
ROORoots from the seedlings (10 cm shoot stage)94.4393101.003108.98381.5639
NODDeveloping tillers at six leaf stage, 3rd internode10.24768.558730.36630.444
CAR5Developing grain, bracts removed (5 DPA)85.38596.142383.949659.9499
CAR15Developing grain, bracts removed (15 DPA)60.313560.52154.393496.0309



CDS Structure of MLOC_37426






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37426.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37426.1CUST_5237_PI427708083AvailableAvailablecontig_2548376 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g27769.1 +3 9e-32 116 52/53 (98%) 13102.m03030 protein 40S ribosomal protein S27, putative, expressed
TAIR PP10 AT3G61110.1 +3 2e-29 109 48/53 (91%) | Symbols: ARS27A, RS27A | ribosomal protein S27 | chr3:22611710-22612632 FORWARD LENGTH=86