MLOC_37423 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.004679.951187.954228.25699
LEAShoots from the seedlings (10 cm shoot stage)18.704624.082825.261819.9437
INF1Young developing inflorescences (5mm)10.27379.094049.612668.09885
INF2Developing inflorescences (1-1.5 cm)19.174213.459816.070717.3521
ROORoots from the seedlings (10 cm shoot stage)12.792116.61115.143319.8135
NODDeveloping tillers at six leaf stage, 3rd internode7.123739.5231212.547634.2533
CAR5Developing grain, bracts removed (5 DPA)5.841875.298825.231225.22733
CAR15Developing grain, bracts removed (15 DPA)4.866144.198664.3995210.0696



CDS Structure of MLOC_37423






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37423.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37423.1CUST_11501_PI427708080AvailableAvailablecontig_2548370 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g41850.1 +1 0.0 1312 692/949 (73%) 13104.m04114 protein NIN, putative, expressed
TAIR PP10 AT2G43500.2 +1 0.0 608 396/976 (41%) Plant regulator RWP-RK family protein | chr2:18062715-18066450 FORWARD LENGTH=947