- Predicted Gene MLOC_37420
MLOC_37420 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 19.272 | 12.1504 | 16.6305 | 14.2746 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 15.3089 | 65.1612 | 13.6533 | 24.0822 |
| INF1 | Young developing inflorescences (5mm) | 12.0903 | 12.2626 | 9.71647 | 9.00558 |
| INF2 | Developing inflorescences (1-1.5 cm) | 19.2884 | 24.7413 | 21.1314 | 22.1824 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 10.9657 | 9.75377 | 7.02068 | 11.5669 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.53247 | 1.62394 | 1.38148 | 5.41245 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 25.68 | 27.656 | 32.0939 | 25.1961 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 31.4401 | 25.9698 | 27.7405 | 58.8225 |
CDS Structure of MLOC_37420
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_37420.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g51690.3 |
+3 |
2e-40 |
143 |
74/87 (85%) |
13105.m05586 protein CCT motif family protein, expressed |
| TAIR PP10 |
AT4G27900.2 |
+3 |
8e-20 |
88 |
46/79 (58%) |
CCT motif family protein | chr4:13890858-13892777 FORWARD LENGTH=261 |