- Predicted Gene MLOC_37400
MLOC_37400 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_37400_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_37400_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 25.83 | 32.3068 | 33.2685 | 30.3941 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 30.4765 | 11.8125 | 14.344 | 16.3779 |
INF1 | Young developing inflorescences (5mm) | 9.96019 | 10.5262 | 8.16702 | 7.99359 |
INF2 | Developing inflorescences (1-1.5 cm) | 8.46263 | 9.91116 | 8.0172 | 9.79688 |
ROO | Roots from the seedlings (10 cm shoot stage) | 18.1913 | 23.902 | 17.4712 | 26.6602 |
NOD | Developing tillers at six leaf stage, 3rd internode | 56.8979 | 77.3353 | 66.3673 | 239.704 |
CAR5 | Developing grain, bracts removed (5 DPA) | 12.8903 | 14.2583 | 13.4457 | 13.1864 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.04421 | 4.86989 | 6.31948 | 11.8273 |
CDS Structure of MLOC_37400
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_37400.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g39490.3 |
+2 |
0.0 |
1041 |
555/716 (78%) |
13108.m04215 protein expressed protein |
TAIR PP10 |
AT2G42320.2 |
+2 |
0.0 |
580 |
315/599 (53%) |
nucleolar protein gar2-related | chr2:17628102-17630657 FORWARD LENGTH=669 |