MLOC_37399 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.131820.163121.134517.6175
LEAShoots from the seedlings (10 cm shoot stage)28.606528.871929.857723.021
INF1Young developing inflorescences (5mm)33.454930.419930.205323.7466
INF2Developing inflorescences (1-1.5 cm)30.341238.822735.855734.4145
ROORoots from the seedlings (10 cm shoot stage)23.664430.210723.125131.0634
NODDeveloping tillers at six leaf stage, 3rd internode25.50924.334531.320777.6148
CAR5Developing grain, bracts removed (5 DPA)25.887724.604923.718121.3638
CAR15Developing grain, bracts removed (15 DPA)19.143416.920917.277736.7182



CDS Structure of MLOC_37399






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37399.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37399.1CUST_11498_PI427708080AvailableAvailablecontig_2548322 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g44500.1 -2 0.0 961 514/542 (95%) 13103.m04788 protein serine/threonine protein phosphatase, putative, expressed
TAIR PP10 AT2G27210.2 -2 0.0 895 474/541 (88%) | Symbols: BSL3 | BRI1 suppressor 1 (BSU1)-like 3 | chr2:11630188-11636182 FORWARD LENGTH=1001