MLOC_37312 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.989085.245715.583146.60936
LEAShoots from the seedlings (10 cm shoot stage)23.081128.013451.953130.426
INF1Young developing inflorescences (5mm)3.984393.976243.885893.80863
INF2Developing inflorescences (1-1.5 cm)1.962481.875461.5972.25131
ROORoots from the seedlings (10 cm shoot stage)0.2827051.043721.331881.30361
NODDeveloping tillers at six leaf stage, 3rd internode18.492426.292443.270193.2965
CAR5Developing grain, bracts removed (5 DPA)5.237686.390895.554826.41476
CAR15Developing grain, bracts removed (15 DPA)0.8262210.7922960.5002161.93354



CDS Structure of MLOC_37312






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37312.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356782NoneNoneNoneNone
MLOC_37312.1CUST_2367_PI427708080AvailableAvailablecontig_2548155 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g51792.1 +3 2e-113 333 179/219 (82%) 13104.m05290 protein PAP fibrillin family domain containing protein, expressed
TAIR PP10 AT5G19940.1 +3 1e-77 241 119/174 (68%) Plastid-lipid associated protein PAP / fibrillin family protein | chr5:6739693-6740661 FORWARD LENGTH=239