MLOC_37293 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains74.572134.215238.717448.3347
LEAShoots from the seedlings (10 cm shoot stage)22.66551.853723.7079910.2103
INF1Young developing inflorescences (5mm)82.7812108.258109.84184.995
INF2Developing inflorescences (1-1.5 cm)63.374183.290365.658385.2433
ROORoots from the seedlings (10 cm shoot stage)59.627926.830531.309440.7568
NODDeveloping tillers at six leaf stage, 3rd internode0.9234730.9362132.321116.8877
CAR5Developing grain, bracts removed (5 DPA)19.028927.509521.734924.8204
CAR15Developing grain, bracts removed (15 DPA)1.4730.9387942.81374.83185



CDS Structure of MLOC_37293






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37293.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37293.1CUST_12223_PI427708083AvailableAvailablecontig_2548122 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g05730.1 -1 1e-13 66 31/32 (97%) 13111.m00557 protein histone H3, putative, expressed
TAIR PP10 AT5G10980.1 -1 6e-14 66 31/32 (97%) Histone superfamily protein | chr5:3472591-3473349 REVERSE LENGTH=136