MLOC_37286 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.567817.101118.57557.47134
LEAShoots from the seedlings (10 cm shoot stage)8.991087.511437.602757.05639
INF1Young developing inflorescences (5mm)25.187328.533830.991922.2181
INF2Developing inflorescences (1-1.5 cm)34.651934.854433.297436.9264
ROORoots from the seedlings (10 cm shoot stage)2.485934.368455.836785.13827
NODDeveloping tillers at six leaf stage, 3rd internode8.5920310.71559.8273438.452
CAR5Developing grain, bracts removed (5 DPA)16.516218.490419.323117.2509
CAR15Developing grain, bracts removed (15 DPA)6.838626.410046.6883114.3493



CDS Structure of MLOC_37286






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37286.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37286.1CUST_5214_PI427708083AvailableAvailablecontig_2548109 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g23590.1 +3 3e-79 268 161/346 (47%) 13101.m02494 protein suppressor of Mek, putative, expressed
TAIR PP10 AT3G06670.1 +3 1e-50 186 132/361 (37%) binding | chr3:2105908-2113136 REVERSE LENGTH=865