MLOC_37282 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.4719210.1566850.411026
LEAShoots from the seedlings (10 cm shoot stage)0.3103810.2491720.3337890.242058
INF1Young developing inflorescences (5mm)0.244310.1443640.2024250.167858
INF2Developing inflorescences (1-1.5 cm)0.5272390.4231420.3985330.490961
ROORoots from the seedlings (10 cm shoot stage)0.1545910.3704920.1688130.344633
NODDeveloping tillers at six leaf stage, 3rd internode00.04636510.03604560.186266
CAR5Developing grain, bracts removed (5 DPA)0.5225830.2264890.2627320.310963
CAR15Developing grain, bracts removed (15 DPA)0.08338840.1303180.2649960.323223



CDS Structure of MLOC_37282






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37282.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37282.1CUST_11485_PI427708080AvailableAvailablecontig_2548104 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g23770.1 -1 6e-101 173 121/310 (39%) 13112.m02415 protein retrotransposon protein, putative, LINE subclass
TAIR PP10None-----