MLOC_3728 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_3728_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_3728_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 34.6749 | 60.9365 | 48.1788 | 50.0634 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 19.4034 | 11.6094 | 14.1119 | 11.6156 |
INF1 | Young developing inflorescences (5mm) | 25.1146 | 27.1405 | 26.4499 | 22.2077 |
INF2 | Developing inflorescences (1-1.5 cm) | 22.0407 | 25.0121 | 18.5246 | 24.7487 |
ROO | Roots from the seedlings (10 cm shoot stage) | 15.4018 | 24.4457 | 29.1645 | 25.2164 |
NOD | Developing tillers at six leaf stage, 3rd internode | 20.596 | 10.2992 | 17.8526 | 28.5194 |
CAR5 | Developing grain, bracts removed (5 DPA) | 22.2168 | 28.5099 | 21.8615 | 23.8686 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.4673 | 5.98133 | 5.18616 | 16.163 |
CDS Structure of MLOC_3728
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3728.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g38970.1 |
+3 |
3e-19 |
88 |
51/61 (84%) |
13107.m04034 protein succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed |
TAIR PP10 |
AT5G23250.2 |
+3 |
2e-14 |
73 |
37/54 (69%) |
Succinyl-CoA ligase, alpha subunit | chr5:7830460-7832265 FORWARD LENGTH=297 |