MLOC_37273 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains20.513828.894327.962125.8865
LEAShoots from the seedlings (10 cm shoot stage)30.154614.475813.752817.1201
INF1Young developing inflorescences (5mm)52.169457.29554.323543.7011
INF2Developing inflorescences (1-1.5 cm)47.657659.906850.521655.5007
ROORoots from the seedlings (10 cm shoot stage)15.144621.451716.219424.1415
NODDeveloping tillers at six leaf stage, 3rd internode25.250429.348923.534293.2224
CAR5Developing grain, bracts removed (5 DPA)32.651830.812730.995128.8764
CAR15Developing grain, bracts removed (15 DPA)9.314949.2636410.013620.082



CDS Structure of MLOC_37273






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37273.8
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37273.8CUST_11484_PI427708080AvailableAvailablecontig_2548091 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g60040.1 +3 0.0 1088 617/664 (93%) 13101.m06386 protein HEAT repeat family protein, putative, expressed
TAIR PP10 AT2G35630.1 +3 0.0 780 442/675 (65%) | Symbols: MOR1, GEM1 | ARM repeat superfamily protein | chr2:14966828-14980361 FORWARD LENGTH=1978