MLOC_37267 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains44.219746.405445.137445.2943
LEAShoots from the seedlings (10 cm shoot stage)33.714324.47928.104424.2457
INF1Young developing inflorescences (5mm)23.673525.273325.6320.8053
INF2Developing inflorescences (1-1.5 cm)27.630227.733425.54829.3582
ROORoots from the seedlings (10 cm shoot stage)34.603336.543429.893741.6874
NODDeveloping tillers at six leaf stage, 3rd internode58.670768.746742.8405200.834
CAR5Developing grain, bracts removed (5 DPA)41.686440.669441.715839.3037
CAR15Developing grain, bracts removed (15 DPA)8.246187.742036.8537718.0324



CDS Structure of MLOC_37267






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37267.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370661NoneNoneNoneNone
MLOC_37267.1CUST_18018_PI427708080AvailableAvailablecontig_2548082 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g03510.1 -1 0.0 1134 539/610 (88%) 13101.m00301 protein WD domain, G-beta repeat domain containing protein, expressed
TAIR PP10 AT3G18060.1 -1 0.0 854 403/609 (66%) transducin family protein / WD-40 repeat family protein | chr3:6183880-6186788 FORWARD LENGTH=609