MLOC_37242 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.039517800.0888622
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)000.02022950.018989
INF2Developing inflorescences (1-1.5 cm)0.01700090.016133500.0248583
ROORoots from the seedlings (10 cm shoot stage)00.023860600.118352
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.0209463000.0191553
CAR15Developing grain, bracts removed (15 DPA)38.088445.624444.4517112.569



CDS Structure of MLOC_37242






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37242.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372909NoneNoneNoneNone
MLOC_37242.1CUST_2360_PI427708080AvailableAvailablecontig_2548032 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g01590.1 +3 0.0 792 388/577 (67%) 13102.m00080 protein glycosyl hydrolases, putative, expressed
TAIR PP10 AT1G62660.1 +3 0.0 605 309/580 (53%) Glycosyl hydrolases family 32 protein | chr1:23199949-23203515 FORWARD LENGTH=648