- Predicted Gene MLOC_37235
MLOC_37235 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_37235_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_37235_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 11.3977 | 15.0783 | 12.9926 | 12.808 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.77198 | 17.6404 | 29.8896 | 14.7693 |
INF1 | Young developing inflorescences (5mm) | 6.13 | 6.80392 | 7.82608 | 5.46298 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.04056 | 7.03086 | 7.08577 | 6.33628 |
ROO | Roots from the seedlings (10 cm shoot stage) | 16.164 | 15.9891 | 15.3008 | 17.2926 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.06571 | 3.02527 | 3.43265 | 9.26604 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.96172 | 4.4024 | 5.00305 | 4.13717 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.79145 | 1.44989 | 1.6646 | 3.5025 |
CDS Structure of MLOC_37235
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_37235.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g11354.1 |
-1 |
0.0 |
723 |
368/481 (77%) |
13110.m01034 protein MATE efflux family protein, putative, expressed |
TAIR PP10 |
AT5G52450.1 |
-1 |
0.0 |
530 |
278/455 (61%) |
MATE efflux family protein | chr5:21289042-21291749 REVERSE LENGTH=486 |