MLOC_37229 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.303410.68089.074558.16574
LEAShoots from the seedlings (10 cm shoot stage)7.325235.476146.421754.4849
INF1Young developing inflorescences (5mm)13.340812.704911.69257.94703
INF2Developing inflorescences (1-1.5 cm)8.408957.210329.224326.93783
ROORoots from the seedlings (10 cm shoot stage)4.7796310.13398.353097.94898
NODDeveloping tillers at six leaf stage, 3rd internode4.892034.325525.8573213.0146
CAR5Developing grain, bracts removed (5 DPA)6.073427.426225.284354.54389
CAR15Developing grain, bracts removed (15 DPA)1.575811.052731.536852.45723



CDS Structure of MLOC_37229






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37229.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37229.1NoneAvailableAvailablecontig_2548009 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g30884.1 +1 1e-26 108 57/76 (75%) 13108.m03198 protein elongation factor Ts, putative, expressed
TAIR PP10 AT4G11120.1 +1 8e-19 86 38/63 (60%) translation elongation factor Ts (EF-Ts), putative | chr4:6778066-6779934 FORWARD LENGTH=395