MLOC_37216 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains52.284296.737487.853985.6324
LEAShoots from the seedlings (10 cm shoot stage)49.710665.304778.207957.0188
INF1Young developing inflorescences (5mm)48.473452.489148.2743.8457
INF2Developing inflorescences (1-1.5 cm)68.682172.721461.999476.9083
ROORoots from the seedlings (10 cm shoot stage)49.404284.497868.94198.1585
NODDeveloping tillers at six leaf stage, 3rd internode76.302104.33443.0451304.08
CAR5Developing grain, bracts removed (5 DPA)81.260172.660475.422675.4134
CAR15Developing grain, bracts removed (15 DPA)9.957488.9927110.484123.0399



CDS Structure of MLOC_37216






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37216.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37216.1CUST_11477_PI427708080AvailableAvailablecontig_2547990 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g18670.1 +2 0.0 1741 1001/1184 (85%) 13101.m02024 protein MDR-like ABC transporter, putative, expressed
TAIR PP10 AT3G62150.1 +2 0.0 1425 808/1188 (68%) | Symbols: PGP21 | P-glycoprotein 21 | chr3:23008755-23013579 REVERSE LENGTH=1296