MLOC_37205 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.844493.11843.400483.08726
LEAShoots from the seedlings (10 cm shoot stage)2.481343.578343.659152.66814
INF1Young developing inflorescences (5mm)3.383554.358355.267593.54015
INF2Developing inflorescences (1-1.5 cm)5.897485.75917.582546.65722
ROORoots from the seedlings (10 cm shoot stage)2.409224.020663.841154.37456
NODDeveloping tillers at six leaf stage, 3rd internode2.429443.19045.6315111.7772
CAR5Developing grain, bracts removed (5 DPA)3.435093.983733.75173.55195
CAR15Developing grain, bracts removed (15 DPA)2.086982.220041.846944.78861



CDS Structure of MLOC_37205






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37205.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37205.1CUST_11475_PI427708080AvailableAvailablecontig_2547972 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g16000.2 -1 2e-167 494 262/414 (63%) 13102.m01793 protein E1-BTB1 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed
TAIR PP10 AT3G61600.2 -1 2e-127 395 219/423 (52%) | Symbols: ATPOB1, POB1 | POZ/BTB containin G-protein 1 | chr3:22795704-22798069 FORWARD LENGTH=561