MLOC_37173 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.517199.4373110.1918.11427
LEAShoots from the seedlings (10 cm shoot stage)10.378511.214810.20558.03091
INF1Young developing inflorescences (5mm)31.547635.195437.109623.1452
INF2Developing inflorescences (1-1.5 cm)60.492747.860360.665650.8629
ROORoots from the seedlings (10 cm shoot stage)13.413617.532619.90517.4868
NODDeveloping tillers at six leaf stage, 3rd internode8.088757.1910712.932425.8767
CAR5Developing grain, bracts removed (5 DPA)11.57513.136412.813810.0343
CAR15Developing grain, bracts removed (15 DPA)4.319335.703394.850648.48263



CDS Structure of MLOC_37173






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37173.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37173.2CUST_11470_PI427708080AvailableAvailablecontig_2547909 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g45270.1 -2 4e-70 227 120/151 (79%) 13103.m04875 protein CS domain containing protein, putative, expressed
TAIR PP10 AT3G03773.1 -2 2e-46 162 92/152 (61%) HSP20-like chaperones superfamily protein | chr3:951885-953490 FORWARD LENGTH=150