MLOC_3713 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.07215 | 4.92314 | 4.63976 | 3.2871 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.58261 | 2.93731 | 3.24291 | 3.03416 |
| INF1 | Young developing inflorescences (5mm) | 4.23097 | 4.53492 | 3.94706 | 3.24254 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.26784 | 3.00234 | 3.31351 | 3.10637 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.83177 | 3.30687 | 2.84244 | 2.91133 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.61548 | 4.55102 | 5.62951 | 13.1031 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.64025 | 4.05393 | 3.43762 | 3.17899 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.952194 | 1.03558 | 1.12609 | 2.11937 |
CDS Structure of MLOC_3713
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3713.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g40450.1 |
+2 |
9e-106 |
335 |
158/224 (71%) |
13112.m04203 protein biotin--protein ligase, putative, expressed |
| TAIR PP10 |
AT1G47578.1 |
+2 |
5e-88 |
285 |
127/224 (57%) |
Biotin/lipoate A/B protein ligase family | chr1:17484365-17485470 FORWARD LENGTH=280 |
