MLOC_37125 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains544.288331.973407.215353.4
LEAShoots from the seedlings (10 cm shoot stage)248.731214.072304.985193.171
INF1Young developing inflorescences (5mm)89.970188.760799.293766.9359
INF2Developing inflorescences (1-1.5 cm)72.010374.706988.468171.9816
ROORoots from the seedlings (10 cm shoot stage)614.036368.586433.139420.385
NODDeveloping tillers at six leaf stage, 3rd internode788.16726.201583.2032003.96
CAR5Developing grain, bracts removed (5 DPA)183.663201.05187.376154.598
CAR15Developing grain, bracts removed (15 DPA)73.996976.802572.0559143.5



CDS Structure of MLOC_37125






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37125.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37125.3CUST_12217_PI427708083AvailableAvailablecontig_2547812 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g05880.1 -1 7e-40 142 79/90 (88%) 13106.m00583 protein profilin domain containing protein, expressed
TAIR PP10 AT2G19770.1 -1 2e-34 126 70/90 (78%) | Symbols: PRF5 | profilin 5 | chr2:8519885-8521119 REVERSE LENGTH=134