MLOC_37124 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains26.023629.516933.953423.9102
LEAShoots from the seedlings (10 cm shoot stage)30.313823.983125.886619.3074
INF1Young developing inflorescences (5mm)54.754354.942560.004438.6226
INF2Developing inflorescences (1-1.5 cm)71.592664.313463.647559.2321
ROORoots from the seedlings (10 cm shoot stage)29.573831.956727.398128.7967
NODDeveloping tillers at six leaf stage, 3rd internode22.453629.092227.858373.4376
CAR5Developing grain, bracts removed (5 DPA)45.628539.97174933.4958
CAR15Developing grain, bracts removed (15 DPA)18.550117.143519.087932.5122



CDS Structure of MLOC_37124






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37124.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37124.3CUST_5202_PI427708083AvailableAvailablecontig_2547806 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g09510.1 -2 3e-34 138 79/93 (85%) 13107.m00958 protein retrotransposon protein, putative, unclassified, expressed
TAIR PP10 AT5G62640.1 -2 3e-12 70 56/95 (59%) | Symbols: ELF5 | proline-rich family protein | chr5:25149584-25152351 REVERSE LENGTH=520