MLOC_37123 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.33588.140426.502687.65239
LEAShoots from the seedlings (10 cm shoot stage)0.5292270.618730.4949530.499665
INF1Young developing inflorescences (5mm)1.2441.525351.362071.28107
INF2Developing inflorescences (1-1.5 cm)1.159341.440840.8812151.43194
ROORoots from the seedlings (10 cm shoot stage)1.579692.681011.232423.13287
NODDeveloping tillers at six leaf stage, 3rd internode0.2348790.3426430.5101871.26879
CAR5Developing grain, bracts removed (5 DPA)0.8773790.8629580.9112660.921915
CAR15Developing grain, bracts removed (15 DPA)0.4626770.4630320.4512891.15616



CDS Structure of MLOC_37123






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37123.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37123.2CUST_11464_PI427708080AvailableAvailablecontig_2547805 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g42750.1 -1 0.0 779 421/555 (76%) 13110.m04029 protein CSLD1 - cellulose synthase-like family D, expressed
TAIR PP10 AT3G03050.1 -1 0.0 666 350/528 (66%) | Symbols: CSLD3, KJK, ATCSLD3 | cellulose synthase-like D3 | chr3:687873-691629 FORWARD LENGTH=1145