MLOC_37108 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.612689.011698.984979.28195
LEAShoots from the seedlings (10 cm shoot stage)7.05516.117116.169896.26841
INF1Young developing inflorescences (5mm)14.735313.804413.017712.8254
INF2Developing inflorescences (1-1.5 cm)16.362815.240417.263619.3109
ROORoots from the seedlings (10 cm shoot stage)3.941357.053486.275159.21927
NODDeveloping tillers at six leaf stage, 3rd internode5.546634.953356.2192220.2038
CAR5Developing grain, bracts removed (5 DPA)8.379468.351418.947939.36068
CAR15Developing grain, bracts removed (15 DPA)2.873573.189582.295037.21511



CDS Structure of MLOC_37108






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37108.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249702.1NoneNoneNoneNone
MLOC_37108.2CUST_2353_PI427708080AvailableAvailablecontig_2547790 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g33800.1 +3 0.0 587 383/478 (80%) 13101.m03410 protein heat shock protein DnaJ, putative, expressed
TAIR PP10 AT1G65280.1 +3 9e-116 365 264/493 (54%) DNAJ heat shock N-terminal domain-containing protein | chr1:24245501-24248521 FORWARD LENGTH=588