MLOC_37069 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.549277.853626.735927.96321
LEAShoots from the seedlings (10 cm shoot stage)0.5337761.450832.006221.14475
INF1Young developing inflorescences (5mm)0.02176220.1557690.1397030.119834
INF2Developing inflorescences (1-1.5 cm)0.7729510.4948920.7714570.810328
ROORoots from the seedlings (10 cm shoot stage)13.2156.9111310.09889.52743
NODDeveloping tillers at six leaf stage, 3rd internode2.971083.108164.843079.6755
CAR5Developing grain, bracts removed (5 DPA)0.0276025000.0254464
CAR15Developing grain, bracts removed (15 DPA)0.4799230.1405980.2893330.790245



CDS Structure of MLOC_37069






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37069.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372681NoneNoneNoneNone
MLOC_37069.1CUST_197_PI427708083AvailableAvailablecontig_2547726 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g38239.1 -3 8e-120 362 187/331 (56%) 13109.m03803 protein sulfotransferase domain containing protein, expressed
TAIR PP10 AT3G45070.1 -3 4e-75 243 130/328 (40%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:16486378-16487349 REVERSE LENGTH=323