- Predicted Gene MLOC_37068
MLOC_37068 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0.158819 | 0.123719 | 0.156566 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.150163 | 0 | 0 | 0.160328 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.0634135 | 0 | 0.0867508 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.081876 | 0 | 0.351777 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0745284 | 0.0881392 | 0.0248057 | 0.245435 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_37068
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_37068.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g31940.1 |
-2 |
8e-30 |
115 |
71/171 (42%) |
13103.m03646 protein transposon protein, putative, Pong sub-class |
| TAIR PP10 |
AT2G13770.1 |
-2 |
5e-19 |
85 |
54/140 (39%) |
CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); Has 451 Blast hits to 352 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 8; Plants - 388; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). | chr2:5736603-5737847 FORWARD LENGTH=343 |