MLOC_37060 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.986827.627921.387820.8698
LEAShoots from the seedlings (10 cm shoot stage)17.147514.977513.410212.4358
INF1Young developing inflorescences (5mm)82.991877.961176.266461.6218
INF2Developing inflorescences (1-1.5 cm)65.114556.490554.387660.6562
ROORoots from the seedlings (10 cm shoot stage)6.1687917.725114.905317.6417
NODDeveloping tillers at six leaf stage, 3rd internode1.005581.184835.161826.01168
CAR5Developing grain, bracts removed (5 DPA)27.134726.377528.428624.6821
CAR15Developing grain, bracts removed (15 DPA)8.670316.69458.2170516.6285



CDS Structure of MLOC_37060






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37060.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363225NoneNoneNoneNone
MLOC_37060.1CUST_2346_PI427708080AvailableAvailablecontig_2547719 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g07300.1 +2 0.0 1018 561/659 (85%) 13112.m00762 protein N-acetyltransferase 10, putative, expressed
TAIR PP10 AT1G10490.1 +2 0.0 1263 679/1028 (66%) Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) | chr1:3453589-3459925 FORWARD LENGTH=1028