- Predicted Gene MLOC_37052
MLOC_37052 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0.057085 | 0.589741 | 0.265084 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 18.6134 | 74.2572 | 49.9008 | 43.3479 |
| INF1 | Young developing inflorescences (5mm) | 0.106713 | 0 | 0.266468 | 0.193862 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0490588 | 0.135853 | 0.570968 | 0.245313 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.877688 | 6.19789 | 11.9335 | 7.64726 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 65.1835 | 47.6533 | 973.251 | 715.521 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.81714 | 0.83427 | 2.07316 | 1.51382 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 32.8464 | 26.8202 | 21.4396 | 68.292 |
CDS Structure of MLOC_37052
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_37052.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g05360.1 |
-3 |
8e-47 |
157 |
96/118 (81%) |
13107.m00487 protein photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT1G79040.1 |
-3 |
4e-29 |
110 |
56/88 (64%) |
| Symbols: PSBR | photosystem II subunit R | chr1:29736085-29736781 FORWARD LENGTH=140 |