MLOC_37049 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains35.032378.826669.885257.5778
LEAShoots from the seedlings (10 cm shoot stage)73.019129.859429.02336.512
INF1Young developing inflorescences (5mm)68.516564.004154.814147.5208
INF2Developing inflorescences (1-1.5 cm)52.240757.382250.103153.3301
ROORoots from the seedlings (10 cm shoot stage)24.490752.137440.504349.3098
NODDeveloping tillers at six leaf stage, 3rd internode49.006448.668829.8296139.428
CAR5Developing grain, bracts removed (5 DPA)76.385367.09167462.325
CAR15Developing grain, bracts removed (15 DPA)17.451713.786316.120932.1464



CDS Structure of MLOC_37049






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37049.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359306NoneNoneNoneNone
MLOC_37049.1CUST_2344_PI427708080AvailableAvailablecontig_2547700 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g14260.2 +3 0.0 2979 1621/1776 (91%) 13103.m01670 protein guanine nucleotide exchange family protein, putative, expressed
TAIR PP10 AT3G60860.1 +3 0.0 2167 1215/1812 (67%) SEC7-like guanine nucleotide exchange family protein | chr3:22484804-22491510 FORWARD LENGTH=1793