MLOC_37025 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.829347.840547.763547.05875
LEAShoots from the seedlings (10 cm shoot stage)12.249312.748813.783211.4781
INF1Young developing inflorescences (5mm)14.020213.844513.105811.5307
INF2Developing inflorescences (1-1.5 cm)20.912721.075418.526622.6093
ROORoots from the seedlings (10 cm shoot stage)5.549378.235055.595839.69842
NODDeveloping tillers at six leaf stage, 3rd internode5.203968.124377.7310826.2942
CAR5Developing grain, bracts removed (5 DPA)20.642920.068921.987720.606
CAR15Developing grain, bracts removed (15 DPA)51.693544.339246.7106108.863



CDS Structure of MLOC_37025






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_37025.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_37025.2CUST_11454_PI427708080AvailableAvailablecontig_2547662 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g01054.2 -2 0.0 1243 699/1181 (59%) 13108.m00006 protein retrotransposon protein, putative, unclassified, expressed
TAIR PP10 AT5G23150.1 -2 8e-92 328 298/873 (34%) | Symbols: HUA2 | Tudor/PWWP/MBT domain-containing protein | chr5:7786173-7792080 FORWARD LENGTH=1392