- Predicted Gene MLOC_36997
MLOC_36997 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 43.1346 | 41.8798 | 40.2303 | 51.183 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 34.0964 | 27.9783 | 24.5668 | 29.0738 |
| INF1 | Young developing inflorescences (5mm) | 78.1081 | 87.4531 | 88.2934 | 82.7256 |
| INF2 | Developing inflorescences (1-1.5 cm) | 78.0485 | 76.7836 | 72.6025 | 96.569 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 21.966 | 35.4983 | 25.6977 | 52.7832 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 16.6171 | 17.7828 | 25.7399 | 77.698 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 46.1839 | 46.256 | 49.8207 | 55.488 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 23.4838 | 23.4562 | 22.7787 | 61.036 |
CDS Structure of MLOC_36997
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_36997.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g58090.1 |
+2 |
0.0 |
596 |
331/356 (93%) |
13102.m06725 protein PSP domain containing protein, expressed |
| TAIR PP10 |
AT4G21660.1 |
+2 |
9e-162 |
486 |
271/357 (76%) |
proline-rich spliceosome-associated (PSP) family protein | chr4:11506259-11509772 REVERSE LENGTH=584 |
