MLOC_36992 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.989353.761184.382124.62945
LEAShoots from the seedlings (10 cm shoot stage)5.600874.948545.729054.24972
INF1Young developing inflorescences (5mm)0.5061230.4850970.6522360.49955
INF2Developing inflorescences (1-1.5 cm)0.6327870.8779950.6359410.90115
ROORoots from the seedlings (10 cm shoot stage)14.90565.753666.932157.74291
NODDeveloping tillers at six leaf stage, 3rd internode20.782338.387547.4826107.986
CAR5Developing grain, bracts removed (5 DPA)1.512732.389671.904442.15142
CAR15Developing grain, bracts removed (15 DPA)0.2769870.07389120.1331260.436501



CDS Structure of MLOC_36992






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36992.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372068NoneNoneNoneNone
MLOC_36992.1CUST_2337_PI427708080AvailableAvailablecontig_2547611 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g41200.1 +1 8e-67 211 113/155 (73%) 13105.m04369 protein OsCML9 - Calmodulin-related calcium sensor protein, expressed
TAIR PP10 AT3G43810.1 +1 1e-30 115 66/148 (45%) | Symbols: CAM7 | calmodulin 7 | chr3:15664619-15666355 REVERSE LENGTH=149